U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pyruvate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836488, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Pyruvate kinase family protein
Primary source
TAIR:AT5G63680
Locus tag
AT5G63680
See related
Araport:AT5G63680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MBK5.16; MBK5_16
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (25490065..25492763)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Scorpion toxin-like knottin superfamily protein Neighboring gene SPT4 homolog 2 Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene zinc ion binding / DNA binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_125763.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables potassium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables pyruvate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Pyruvate kinase family protein
NP_201173.1
  • Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25490065..25492763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345601.1 → NP_001331217.1  Pyruvate kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
    Conserved Domains (1) summary
    PLN02461
    Location:1 → 510
    PLN02461; Probable pyruvate kinase

  2. NM_001345602.1 → NP_001331216.1  Pyruvate kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
    Conserved Domains (1) summary
    PLN02461
    Location:1 → 510
    PLN02461; Probable pyruvate kinase

  3. NM_125763.3 → NP_201173.1  Pyruvate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201173.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
    Conserved Domains (1) summary
    PLN02461
    Location:1 → 510
    PLN02461; Probable pyruvate kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools