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FACT HXXXD-type acyl-transferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836475, updated on 18-Sep-2024

Summary

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Official Symbol
FACT
Official Full Name
HXXXD-type acyl-transferase family protein
Primary source
TAIR:AT5G63560
Locus tag
AT5G63560
See related
Araport:AT5G63560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
FATTY ALCOHOL:CAFFEOYL-CoA CAFFEOYL TRANSFERASE; MBK5.2; MBK5_2
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Genomic context

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See FACT in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (25449311..25451419)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene recQ-mediated instability protein (DUF1767) Neighboring gene DEK domain-containing chromatin associated protein Neighboring gene glutamate-1-semialdehyde-2,1-aminomutase Neighboring gene flavonol synthase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of an Arabidopsis fatty alcohol:caffeoyl-Coenzyme A acyltransferase required for the synthesis of alkyl hydroxycinnamates in root waxes. Kosma DK, et al. Plant Physiol, 2012 Sep. PMID 22797656, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. FACT is involved in alkyl caffeate ester synthesis in roots.
    Title: Identification of an Arabidopsis fatty alcohol:caffeoyl-Coenzyme A acyltransferase required for the synthesis of alkyl hydroxycinnamates in root waxes.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_125751.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables caffeoyl-CoA: alcohol caffeoyl transferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within alkyl caffeate ester biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

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Preferred Names
HXXXD-type acyl-transferase family protein
NP_201161.1
  • HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G48720.1); Has 2881 Blast hits to 2866 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 171; Plants - 2704; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25449311..25451419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125751.3 → NP_201161.1  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201161.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LE88, Q9FFQ7
    UniProtKB/TrEMBL
    A0A178UFT5, A0A5S9YGM3
    Conserved Domains (1) summary
    PLN02481
    Location:1 → 426
    PLN02481; Omega-hydroxypalmitate O-feruloyl transferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FFQ7.1

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