U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C2H2-like zinc finger protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836448, updated on 18-Sep-2024

Summary

Official Full Name
C2H2-like zinc finger protein
Primary source
TAIR:AT5G63280
Locus tag
AT5G63280
See related
Araport:AT5G63280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDC12.25; MDC12_25
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (25367031..25369297)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene RPM1-interacting protein 4 (RIN4) family protein Neighboring gene Radical SAM superfamily protein Neighboring gene ncRNA Neighboring gene Ribosomal protein S21 family protein Neighboring gene nucleoside diphosphate kinase 2

General gene information

NM_125723.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
C2H2-like zinc finger protein
NP_568969.1
  • C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25367031..25369297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125723.3NP_568969.1  C2H2-like zinc finger protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568969.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U777, Q8VZP2, Q9FMJ5