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Disease resistance protein (CC-NBS-LRR class) family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836422, updated on 18-Sep-2024

Summary

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Official Full Name
Disease resistance protein (CC-NBS-LRR class) family
Primary source
TAIR:AT5G63020
Locus tag
AT5G63020
See related
Araport:AT5G63020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJH22.8; MJH22_8
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (25283063..25286121, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene Thioredoxin superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An unreported NB-LRR protein SUT1 is required for the autoimmune response mediated by type one protein phosphatase 4 mutation (topp4-1) in Arabidopsis. Yan J, et al. Plant J, 2019 Oct. PMID 31257685
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_125696.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Disease resistance protein (CC-NBS-LRR class) family
NP_201107.2
  • Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 14258 Blast hits to 13662 proteins in 567 species: Archae - 8; Bacteria - 542; Metazoa - 1192; Fungi - 130; Plants - 12234; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25283063..25286121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125696.4 → NP_201107.2  Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201107.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04666, Q8RXS5, Q9FM50
    UniProtKB/TrEMBL
    A0A178UHJ2, A0A5S9YGK0, A0A654GEL4
    Conserved Domains (3) summary
    COG4886
    Location:502 → 634
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:535 → 558
    LRR_1; leucine-rich repeat [structural motif]
    pfam00931
    Location:161 → 400
    NB-ARC; NB-ARC domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RXS5.2

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