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SGNH hydrolase-type esterase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836413, updated on 18-Sep-2024

Summary

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Official Full Name
SGNH hydrolase-type esterase superfamily protein
Primary source
TAIR:AT5G62930
Locus tag
AT5G62930
See related
Araport:AT5G62930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQB2.25; MQB2_25
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (25254821..25256619)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene basic-leucine zipper transcription factor K Neighboring gene RING/U-box superfamily protein Neighboring gene response regulator 6 Neighboring gene Dof-type zinc finger DNA-binding family protein Neighboring gene RNA polymerase II, Rpb4, core protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression Pattern and Functional Analyses of Arabidopsis Guard Cell-Enriched GDSL Lipases. Xiao C, et al. Front Plant Sci, 2021. PMID 34621289, Free PMC Article
  2. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_125687.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SGNH hydrolase-type esterase superfamily protein
NP_201098.1
  • SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25254821..25256619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345566.1 → NP_001332344.1  SGNH hydrolase-type esterase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BGN5, A0A5S9YGI9, A0A654GEK2

  2. NM_001345567.1 → NP_001332345.1  SGNH hydrolase-type esterase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BGM5

  3. NM_125687.3 → NP_201098.1  SGNH hydrolase-type esterase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201098.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FM04
    UniProtKB/TrEMBL
    A0A178UF04, A0A7G2FJ59
    Conserved Domains (1) summary
    cd01838
    Location:5 → 207
    Isoamyl_acetate_hydrolase_like; Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FM04.3

Gene LinkOut

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