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Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836356, updated on 18-Sep-2024

Summary

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Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily protein
Primary source
TAIR:AT5G62350
Locus tag
AT5G62350
See related
Araport:AT5G62350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MMI9.21; MMI9_21
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (25037191..25038424)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene ncRNA Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_125629.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of catalytic activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily protein
NP_201041.1
  • Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25037191..25038424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125629.3 → NP_201041.1  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201041.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UCF3, A0A5S9YGD0, Q8L8T0, Q9LVA4
    Conserved Domains (1) summary
    cd15798
    Location:41 → 200
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
Nucleotide Protein
Heading Accession and Version

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