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GT18 glycosyltransferase 18 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836343, updated on 18-Sep-2024

Summary

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Official Symbol
GT18
Official Full Name
glycosyltransferase 18
Primary source
TAIR:AT5G62220
Locus tag
AT5G62220
See related
Araport:AT5G62220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATGT18; glycosyltransferase 18; MMI9.5; MMI9_5; XLT2; Xyloglucan L-side chain galactosylTransferase position 2
Summary
Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.
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Genomic context

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See GT18 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (24988214..24990331, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Embryo-specific protein 3, (ATS3) Neighboring gene Embryo-specific protein 3, (ATS3) Neighboring gene ncRNA Neighboring gene ERECTA-like 1 Neighboring gene Cell cycle regulated microtubule associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-Seq analysis of developing nasturtium seeds (Tropaeolum majus): identification and characterization of an additional galactosyltransferase involved in xyloglucan biosynthesis. Jensen JK, et al. Mol Plant, 2012 Sep. PMID 22474179, Free PMC Article
  2. Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis. Kong Y, et al. Plant Physiol, 2015 Apr. PMID 25673778, Free PMC Article
  3. Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes. Chou YH, et al. Plant Cell Physiol, 2015 Feb. PMID 25392066
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_125616.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables galactosyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within xyloglucan biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glycosyltransferase 18
NP_201028.1
  • glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24988214..24990331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125616.2 → NP_201028.1  glycosyltransferase 18 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201028.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4K6F1, Q9LVB4
    UniProtKB/TrEMBL
    A0A178UBL9, A0A5S9YGI4, A0A654GD91
    Conserved Domains (1) summary
    pfam03016
    Location:117 → 449
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4K6F1.1

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