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ZIP12 zinc transporter 12 precursor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836336, updated on 18-Sep-2024

Summary

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Official Symbol
ZIP12
Official Full Name
zinc transporter 12 precursor
Primary source
TAIR:AT5G62160
Locus tag
AT5G62160
See related
Araport:AT5G62160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtZIP12; MTG10.20; MTG10_20; zinc transporter 12 precursor
Summary
member of Fe(II) transporter isolog family
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Genomic context

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See ZIP12 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (24960107..24961864)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ATP-dependent Clp protease ATP-binding subunit Neighboring gene peptidoglycan-binding LysM domain-containing protein Neighboring gene ncRNA Neighboring gene AGAMOUS-like 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of putative target genes of bZIP19, a transcription factor essential for Arabidopsis adaptation to Zn deficiency in roots. Inaba S, et al. Plant J, 2015 Oct. PMID 26306426
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metal ion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in zinc ion transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
zinc transporter 12 precursor
NP_201022.1
  • zinc transporter 12 precursor (ZIP12); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 1 precursor (TAIR:AT3G12750.1); Has 2095 Blast hits to 1976 proteins in 316 species: Archae - 2; Bacteria - 158; Metazoa - 583; Fungi - 630; Plants - 500; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24960107..24961864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125609.2 → NP_201022.1  zinc transporter 12 precursor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201022.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FIS2
    UniProtKB/TrEMBL
    A0A178UGP0, A0A5S9YGB0
    Conserved Domains (1) summary
    cl00437
    Location:32 → 355
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FIS2.1

Gene LinkOut

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