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Ribosomal protein S19e family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836238, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein S19e family protein
Primary source
TAIR:AT5G61170
Locus tag
AT5G61170
See related
Araport:AT5G61170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MAF19.23; MAF19_23
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (24611032..24612564)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene leo1-like family protein Neighboring gene anthocyanin 5-aromatic acyltransferase 1 Neighboring gene Putative endonuclease or glycosyl hydrolase Neighboring gene putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_125510.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosolic ribosome HDA PubMed 
part_of cytosolic small ribosomal subunit HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein S19e family protein
NP_200925.1
  • Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24611032..24612564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125510.5 → NP_200925.1  Ribosomal protein S19e family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200925.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FNP8
    UniProtKB/TrEMBL
    A0A178USU3, A0A384KY83, A0A7G2EF58, Q67ZX8
    Conserved Domains (1) summary
    pfam01090
    Location:6 → 142
    Ribosomal_S19e; Ribosomal protein S19e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FNP8.1

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