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Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836178, updated on 18-Sep-2024

Summary

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Official Full Name
Galactose oxidase/kelch repeat superfamily protein
Primary source
TAIR:AT5G60570
Locus tag
AT5G60570
See related
Araport:AT5G60570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MUF9.20; MUF9_20
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (24347783..24350164)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Defensin-like (DEFL) family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene DHBP synthase RibB-like alpha/beta domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. Schumann N, et al. Plant Physiol, 2011 Feb. PMID 21119043, Free PMC Article
  2. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001345425.1
NM_125450.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Galactose oxidase/kelch repeat superfamily protein
NP_200865.1
  • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G26930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24347783..24350164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345424.1 → NP_001331512.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56XE5, Q9FKJ0
    UniProtKB/TrEMBL
    A0A178UDZ8, A0A5S9YG11
    Conserved Domains (2) summary
    PHA03098
    Location:120 → 325
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:180 → 225
    Kelch; KELCH repeat [structural motif]

  2. NM_125450.4 → NP_200865.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200865.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56XE5, Q9FKJ0
    UniProtKB/TrEMBL
    A0A178UDZ8, A0A5S9YG11
    Conserved Domains (2) summary
    PHA03098
    Location:120 → 325
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:180 → 225
    Kelch; KELCH repeat [structural motif]

  3. NM_001345425.1 → NP_001331513.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56XE5, Q9FKJ0
    UniProtKB/TrEMBL
    A0A178UDZ8, A0A5S9YG11
    Conserved Domains (2) summary
    PHA03098
    Location:120 → 325
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:180 → 225
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FKJ0.1

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