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antiporter/ drug transporter [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836164, updated on 18-Sep-2024

Summary

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Official Full Name
antiporter/ drug transporter
Primary source
TAIR:AT5G60430
Locus tag
AT5G60430
See related
Araport:AT5G60430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MUF9.6; MUF9_6
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (24301549..24303369)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein Neighboring gene AGAMOUS-like 62 Neighboring gene auxin response factor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001037033.3
NM_001345417.1
NM_125436.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ribonuclease P activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
antiporter/ drug transporter
NP_001032110.1
  • drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 105 Blast hits to 104 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
NP_200851.1
  • drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24301549..24303369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345416.1 → NP_001332091.1  antiporter/ drug transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YGX3, Q9FKK3

  2. NM_125436.4 → NP_200851.1  antiporter/ drug transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200851.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YGX3, Q9FKK3
    Conserved Domains (1) summary
    cl20439
    Location:31 → 121
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

  3. NM_001037033.3 → NP_001032110.1  antiporter/ drug transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032110.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YGX3, Q9FKK3
    Conserved Domains (1) summary
    cl20439
    Location:31 → 121
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

  4. NM_001345417.1 → NP_001332092.1  antiporter/ drug transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YGX3, Q9FKK3
Nucleotide Protein
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