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HSP18.2 heat shock protein 18.2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836093, updated on 18-Sep-2024

Summary

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Official Symbol
HSP18.2
Official Full Name
heat shock protein 18.2
Primary source
TAIR:AT5G59720
Locus tag
AT5G59720
See related
Araport:AT5G59720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
heat shock protein 18.2; MTH12.7; MTH12_7
Summary
encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.
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Genomic context

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See HSP18.2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (24062323..24063300)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene VIRE2 interacting protein 2 Neighboring gene ncRNA Neighboring gene exocyst subunit exo70 family protein H7 Neighboring gene UDP-N-acetylglucosamine (UAA) transporter family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression and promoter analysis of the OsHSP16.9C gene in rice. Zhang Y, et al. Biochem Biophys Res Commun, 2016 Oct 14. PMID 27639642
  2. Small heat shock protein Hsp17.8 functions as an AKR2A cofactor in the targeting of chloroplast outer membrane proteins in Arabidopsis. Kim DH, et al. Plant Physiol, 2011 Sep. PMID 21730198, Free PMC Article
  3. Gene expression profiles during heat acclimation in Arabidopsis thaliana suspension-culture cells. Lim CJ, et al. J Plant Res, 2006 Jul. PMID 16807682
  4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. heat induction mechanisms of OsHSP16.9C and AtHSP18.2 are similar in rice and Arabidopsis
    Title: Expression and promoter analysis of the OsHSP16.9C gene in rice.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_125364.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within heat acclimation IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to heat IEP
Inferred from Expression Pattern
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
heat shock protein 18.2
NP_200780.1
  • heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24062323..24063300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125364.3 → NP_200780.1  heat shock protein 18.2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200780.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P19037, Q0WQZ8, Q8L8S1
    UniProtKB/TrEMBL
    A0A178UES7, A0A5S9YG28
    Conserved Domains (1) summary
    cd06472
    Location:53 → 144
    ACD_ScHsp26_like; Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P19037.1

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