U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CIPK21 CBL-interacting protein kinase 21 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835868, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
CIPK21
Official Full Name
CBL-interacting protein kinase 21
Primary source
TAIR:AT5G57630
Locus tag
AT5G57630
See related
Araport:AT5G57630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CBL-interacting protein kinase 21; MUA2.22; MUA2_22; SNF1-RELATED PROTEIN KINASE 3.4; SnRK3.4
Summary
CBL-interacting protein kinase
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CIPK21 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (23340746..23343489, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myb domain protein 36 Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene ncRNA Neighboring gene GCK domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Calcineurin B-Like Protein-Interacting Protein Kinase CIPK21 Regulates Osmotic and Salt Stress Responses in Arabidopsis. Pandey GK, et al. Plant Physiol, 2015 Sep. PMID 26198257, Free PMC Article
  2. Arabidopsis POT1A interacts with TERT-V(I8), an N-terminal splicing variant of telomerase. Rossignol P, et al. J Cell Sci, 2007 Oct 15. PMID 17911168
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CIPK21 mediates responses to salt stress condition in Arabidopsis.
    Title: Calcineurin B-Like Protein-Interacting Protein Kinase CIPK21 Regulates Osmotic and Salt Stress Responses in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001345268.1
NM_001345269.1
NM_125144.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to osmotic stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cellular response to salt stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CBL-interacting protein kinase 21
NP_568860.1
  • CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23340746..23343489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125144.4 → NP_568860.1  CBL-interacting protein kinase 21 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568860.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RWJ1, Q94CG0, Q9FKL0
    UniProtKB/TrEMBL
    A0A5S9YHA7, A0A654GBZ0
    Conserved Domains (2) summary
    cd12195
    Location:297 → 411
    CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
    cl21453
    Location:11 → 263
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001345268.1 → NP_001330674.1  CBL-interacting protein kinase 21 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UR90, A0A1P8BBI3, A0A384LAE1, A0A654GBZ0

  3. NM_001345269.1 → NP_001330673.1  CBL-interacting protein kinase 21 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBK1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94CG0.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.