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U-box domain-containing protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835807, updated on 18-Sep-2024

Summary

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Official Full Name
U-box domain-containing protein kinase family protein
Primary source
TAIR:AT5G57035
Locus tag
AT5G57035
See related
Araport:AT5G57035
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Sequence:
Chromosome: 5; NC_003076.8 (23080647..23083988)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene casein kinase I-like 12 Neighboring gene myristoyl-CoA:protein N-myristoyltransferase Neighboring gene Lycopene beta/epsilon cyclase protein Neighboring gene Lactoylglutathione lyase / glyoxalase I family protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene 60S ribosomal L18a-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_148143.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
U-box domain-containing protein kinase family protein
NP_680448.2
  • U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23080647..23083988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148143.4 → NP_680448.2  U-box domain-containing protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680448.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UBP2, A0A5S9YEZ7, F4K964
    Conserved Domains (4) summary
    smart00504
    Location:711 → 774
    Ubox; Modified RING finger domain
    cd01989
    Location:20 → 176
    STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
    pfam00069
    Location:429 → 678
    Pkinase; Protein kinase domain
    cl21453
    Location:431 → 691
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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