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FBD, F-box and Leucine Rich Repeat domains containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835770, updated on 18-Sep-2024

Summary

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Official Full Name
FBD, F-box and Leucine Rich Repeat domains containing protein
Primary source
TAIR:AT5G56690
Locus tag
AT5G56690
See related
Araport:AT5G56690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MIK19.14; MIK19_14
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (22939723..22941099)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene IAA-leucine resistant (ILR)-like 2 Neighboring gene Ribosomal protein S30 family protein Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene FBD / Leucine Rich Repeat domains containing protein Neighboring gene Ribosomal protein L31e family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
FBD, F-box and Leucine Rich Repeat domains containing protein
NP_200480.1
  • FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT5G56700.1); Has 2091 Blast hits to 2055 proteins in 38 species: Archae - 0; Bacteria - 13; Metazoa - 7; Fungi - 0; Plants - 2069; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22939723..22941099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125052.1 → NP_200480.1  FBD, F-box and Leucine Rich Repeat domains containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200480.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FJU3
    UniProtKB/TrEMBL
    A0A5S9YEP0
    Conserved Domains (4) summary
    sd00032
    Location:136 → 157
    LRR_2; leucine-rich repeat [structural motif]
    pfam07723
    Location:157 → 182
    LRR_2; Leucine Rich Repeat
    pfam00646
    Location:4 → 46
    F-box; F-box domain
    pfam08387
    Location:356 → 399
    FBD
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FJU3.1

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