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PFK7 phosphofructokinase 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835764, updated on 18-Sep-2024

Summary

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Official Symbol
PFK7
Official Full Name
phosphofructokinase 7
Primary source
TAIR:AT5G56630
Locus tag
AT5G56630
See related
Araport:AT5G56630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MIK19.8; MIK19_8; phosphofructokinase 7
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Genomic context

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See PFK7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (22923804..22926963)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Phosphotyrosine protein phosphatases superfamily protein Neighboring gene NAC domain containing protein 99 Neighboring gene ncRNA Neighboring gene myo-inositol oxygenase 5 Neighboring gene IAA-leucine resistant (ILR)-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterisation of the ATP-dependent phosphofructokinase gene family from Arabidopsis thaliana. Mustroph A, et al. FEBS Lett, 2007 May 29. PMID 17485088
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. cDNAs resulted in elevated phosphofructokinase, but not a prophosphate-dependt form, after transient expression in tobacco leaves.
    Title: Characterisation of the ATP-dependent phosphofructokinase gene family from Arabidopsis thaliana.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_125046.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glycolytic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
phosphofructokinase 7
NP_568842.1
  • phosphofructokinase 7 (PFK7); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22923804..22926963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125046.3 → NP_568842.1  phosphofructokinase 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568842.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C5J7, Q9FJU5
    UniProtKB/TrEMBL
    A0A178UBY8, A0A5S9YES2
    Conserved Domains (1) summary
    PLN02564
    Location:5 → 485
    PLN02564; 6-phosphofructokinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C5J7.1

Gene LinkOut

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