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glycine-rich protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835662, updated on 18-Sep-2024

Summary

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Official Full Name
glycine-rich protein
Primary source
TAIR:AT5G55680
Locus tag
AT5G55680
See related
Araport:AT5G55680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDF20.12; MDF20_12
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (22547445..22548679, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DEK domain-containing chromatin associated protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene MADS-box transcription factor family protein Neighboring gene beta-amylase 4 Neighboring gene TIC 20-v-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_124950.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glycine-rich protein
NP_200379.1
  • glycine-rich protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22547445..22548679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124950.2 → NP_200379.1  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200379.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UIM6, A0A654GB94, Q9FM70
    Conserved Domains (1) summary
    TIGR00927
    Location:63 → 183
    2A1904; K+-dependent Na+/Ca+ exchanger
Nucleotide Protein
Heading Accession and Version

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