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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835651, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G55570
Locus tag
AT5G55570
See related
Araport:AT5G55570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDF20.1; MDF20_1
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (22514214..22515458, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene defensin-like protein Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Agenet and bromo-adjacent homology (BAH) domain-containing protein Neighboring gene isopentenyl-diphosphate delta-isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001345143.1
NM_124939.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_200368.2
  • unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22514214..22515458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124939.4 → NP_200368.2  uncharacterized protein AT5G55570 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200368.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UPN7, A0A5S9YFF3, F4K4X2
    Conserved Domains (1) summary
    PRK14282
    Location:101 → 130
    PRK14282; chaperone protein DnaJ; Provisional

  2. NM_001345143.1 → NP_001331727.1  uncharacterized protein AT5G55570 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BER1, Q9FM81
Nucleotide Protein
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