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ribosomal protein L30 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835607, updated on 18-Sep-2024

Summary

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Official Full Name
ribosomal protein L30 family protein
Primary source
TAIR:AT5G55140
Locus tag
AT5G55140
See related
Araport:AT5G55140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MCO15.9; MCO15_9
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (22380996..22382194)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Defensin-like (DEFL) family protein Neighboring gene uncharacterized protein Neighboring gene F-box SKIP23-like protein (DUF295) Neighboring gene small ubiquitin-like modifier 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_124896.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L30 family protein
NP_568821.1
  • ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22380996..22382194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124896.3 → NP_568821.1  ribosomal protein L30 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568821.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U792, Q8L908
    Conserved Domains (1) summary
    TIGR01308
    Location:19 → 72
    rpmD_bact; ribosomal protein L30, bacterial/organelle
Nucleotide Protein
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