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hypothetical protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835521, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF295)
Primary source
TAIR:AT5G54330
Locus tag
AT5G54330
See related
Araport:AT5G54330
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDK4.15; MDK4_15
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (22064993..22066063)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ARF-GAP domain 5 Neighboring gene hypothetical protein (DUF295) Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene C2H2-type zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_124813.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF295)
NP_200244.1
  • Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G55880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22064993..22066063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124813.1 → NP_200244.1  hypothetical protein (DUF295) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200244.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UQP9, Q9FL67
Nucleotide Protein
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