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Late embryogenesis abundant protein (LEA) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835463, updated on 18-Sep-2024

Summary

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Official Full Name
Late embryogenesis abundant protein (LEA) family protein
Primary source
TAIR:AT5G53820
Locus tag
AT5G53820
See related
Araport:AT5G53820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MGN6.21; MGN6_21
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (21853348..21854117)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nucleic acid-binding protein Neighboring gene O-methyltransferase family protein Neighboring gene pseudo Neighboring gene VQ motif-containing protein Neighboring gene F-box/RNI-like/FBD-like domains-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_124761.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Late embryogenesis abundant protein (LEA) family protein
NP_200193.1
  • Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G38760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21853348..21854117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124761.2 → NP_200193.1  Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200193.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9FHZ4
Nucleotide Protein
Heading Accession and Version

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