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SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835441, updated on 18-Sep-2024

Summary

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Official Full Name
SAUR-like auxin-responsive protein family
Primary source
TAIR:AT5G53590
Locus tag
AT5G53590
See related
Araport:AT5G53590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MNC6.13; MNC6_13; SAUR30; SMALL AUXIN UPREGULATED RNA 30
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (21771811..21772794)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cytochrome B5 isoform E Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene FBD-like domain family protein Neighboring gene Carbohydrate-binding X8 domain superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Miscellaneous features

  • Loc: 21771868-21771972 AT5G53590.uORF1
NM_124739.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to auxin IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
SAUR-like auxin-responsive protein family
NP_200171.2
  • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G00880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21771811..21772794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124739.4 → NP_200171.2  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200171.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UGY9, A0A7G2FKD6, Q6NPG2, Q9FJC5
    Conserved Domains (1) summary
    pfam02519
    Location:46 → 110
    Auxin_inducible; Auxin responsive protein
Nucleotide Protein
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