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PDV1 plastid division1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835409, updated on 18-Sep-2024

Summary

Official Symbol
PDV1
Official Full Name
plastid division1
Primary source
TAIR:AT5G53280
Locus tag
AT5G53280
See related
Araport:AT5G53280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K19E1.8; K19E1_8; PLASTID DIVISION1
Summary
An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site.
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Genomic context

See PDV1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (21607410..21609428)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Seed maturation protein Neighboring gene Seed maturation protein Neighboring gene cytokinin response factor 3 Neighboring gene ubiquitin-conjugating enzyme 10

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_124707.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within chloroplast fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chloroplast fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to gibberellin IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
plastid division1
NP_200140.1
  • PLASTID DIVISION1 (PDV1); BEST Arabidopsis thaliana protein match is: plastid division2 (TAIR:AT2G16070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21607410..21609428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124707.4NP_200140.1  plastid division1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200140.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LBC3, Q9FK13
    UniProtKB/TrEMBL
    A0A178UJ67, A0A5S9YEA4