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AGP22 arabinogalactan protein 22 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835406, updated on 18-Sep-2024

Summary

Official Symbol
AGP22
Official Full Name
arabinogalactan protein 22
Primary source
TAIR:AT5G53250
Locus tag
AT5G53250
See related
Araport:AT5G53250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
arabinogalactan protein 22; ARABINOGALACTAN PROTEIN 22; ATAGP22; K19E1.5; K19E1_5
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Genomic context

See AGP22 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (21603569..21604414)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF295) Neighboring gene hypothetical protein (DUF295) Neighboring gene Seed maturation protein Neighboring gene Seed maturation protein

General gene information

NM_124704.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in membrane PubMed 
located_in plasma membrane  

General protein information

Preferred Names
arabinogalactan protein 22
NP_200137.1
  • arabinogalactan protein 22 (AGP22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1070 (InterPro:IPR009424); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 20 (TAIR:AT3G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21603569..21604414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124704.3 → NP_200137.1  arabinogalactan protein 22 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200137.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FK16
    UniProtKB/TrEMBL
    A0A178UC75, A0A5S9YDK8
    Conserved Domains (1) summary
    pfam06376
    Location:29 → 62
    AGP; Arabinogalactan peptide
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