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ADF10 actin depolymerizing factor 10 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835312, updated on 18-Sep-2024

Summary

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Official Symbol
ADF10
Official Full Name
actin depolymerizing factor 10
Primary source
TAIR:AT5G52360
Locus tag
AT5G52360
See related
Araport:AT5G52360
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin depolymerizing factor 10; K24M7.10; K24M7_10
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Genomic context

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See ADF10 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (21257934..21259408, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene exocyst subunit exo70 family protein A3 Neighboring gene tRNA-Ser Neighboring gene 28S ribosomal S34 protein Neighboring gene VASCULAR-RELATED NAC-DOMAIN 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ADF10 shapes the overall organization of apical actin filaments by promoting their turnover and ordering in pollen tubes. Jiang Y, et al. J Cell Sci, 2017 Dec 1. PMID 29061882
  2. Differential sensitivity of ADF isovariants to a pH gradient promotes pollen tube growth. Wang J, et al. J Cell Biol, 2023 Nov 6. PMID 37610419, Free PMC Article
  3. Actin depolymerizing factors ADF7 and ADF10 play distinct roles during pollen development and pollen tube growth. Daher FB, et al. Plant Signal Behav, 2012 Jul. PMID 22751315, Free PMC Article
  4. Spatial and temporal expression of actin depolymerizing factors ADF7 and ADF10 during male gametophyte development in Arabidopsis thaliana. Bou Daher F, et al. Plant Cell Physiol, 2011 Jul. PMID 21632657
  5. Proteomic analyses of apoplastic proteins from germinating Arabidopsis thaliana pollen. Ge W, et al. Biochim Biophys Acta, 2011 Dec. PMID 21798377, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Differential sensitivity of ADF isovariants to a pH gradient promotes pollen tube growth.
    Title: Differential sensitivity of ADF isovariants to a pH gradient promotes pollen tube growth.
  2. ADF7 and ADF10 play distinct roles during pollen development and pollen tube growth.
    Title: Actin depolymerizing factors ADF7 and ADF10 play distinct roles during pollen development and pollen tube growth.
  3. ADF7 and ADF10 were differentially expressed with the ADF7 signal appearing in the microspore stage and that of ADF10 only during the polarized microspore stage. ADF10 was associated with filamentous actin in the developing gametophyte.
    Title: Spatial and temporal expression of actin depolymerizing factors ADF7 and ADF10 during male gametophyte development in Arabidopsis thaliana.
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General gene information

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NM_124615.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within actin filament depolymerization IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within pollen tube growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IDA
Inferred from Direct Assay
more info
 PubMed 
located_in apoplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
actin depolymerizing factor 10
NP_568769.1
  • actin depolymerizing factor 10 (ADF10); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 7 (TAIR:AT4G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21257934..21259408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124615.4 → NP_568769.1  actin depolymerizing factor 10 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568769.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6QRD0, Q8LFH6, Q9FHC4
    UniProtKB/TrEMBL
    A0A178UBW2, A0A5S9YD99, A0A654GAR4
    Conserved Domains (1) summary
    cd11286
    Location:6 → 136
    ADF_cofilin_like; Cofilin, Destrin, and related actin depolymerizing factors
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LFH6.2

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