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Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835267, updated on 18-Sep-2024

Summary

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Official Full Name
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Primary source
TAIR:AT5G51920
Locus tag
AT5G51920
See related
Araport:AT5G51920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJM18.1; MJM18_1
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (21097076..21098959, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 family protein Neighboring gene TCP family transcription factor Neighboring gene uncharacterized protein Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene RNA polymerase Rpb6 Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_124571.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
NP_200005.1
  • Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21097076..21098959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124571.3 → NP_200005.1  Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200005.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UGN1, Q9FGL6
    Conserved Domains (1) summary
    cl18945
    Location:185 → 459
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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