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DNA/RNA-binding protein Kin17, conserved region [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835254, updated on 18-Sep-2024

Summary

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Official Full Name
DNA/RNA-binding protein Kin17, conserved region
Primary source
TAIR:AT5G51795
Locus tag
AT5G51795
See related
Araport:AT5G51795
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (21043083..21044194, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene gibberellin 20 oxidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis KIN17 and its homolog KLP mediate different aspects of plant growth and development. Garcia-Molina A, et al. Plant Signal Behav, 2014. PMID 24713636, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DNA/RNA-binding protein Kin17, conserved region
NP_680423.1
  • DNA/RNA-binding protein Kin17, conserved region; CONTAINS InterPro DOMAIN/s: DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT1G55460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21043083..21044194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148118.1 → NP_680423.1  DNA/RNA-binding protein Kin17, conserved region [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680423.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4KDD7
    UniProtKB/TrEMBL
    A0A5S9YD44
    Conserved Domains (2) summary
    cd13155
    Location:293 → 346
    KOW_KIN17; KOW_Kin17 is a RNA-binding motif
    pfam10357
    Location:71 → 155
    Kin17_mid; Domain of Kin17 curved DNA-binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4KDD7.1

Gene LinkOut

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