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Ribosomal protein L11 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835235, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L11 family protein
Primary source
TAIR:AT5G51610
Locus tag
AT5G51610
See related
Araport:AT5G51610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K17N15.16; K17N15_16
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (20965577..20966805)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AT hook motif DNA-binding family protein Neighboring gene Microtubule associated protein (MAP65/ASE1) family protein Neighboring gene Uncharacterized protein family (UPF0172) Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene trichome birefringence-like protein (DUF828)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ribosomal protein L11 family protein
NP_199974.1
  • Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 8145 Blast hits to 8145 proteins in 2775 species: Archae - 291; Bacteria - 5426; Metazoa - 99; Fungi - 120; Plants - 103; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    20965577..20966805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124540.1 → NP_199974.1  Ribosomal protein L11 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199974.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UAU2, Q9FHM3
    Conserved Domains (1) summary
    cl29338
    Location:71 → 168
    Ribosomal_L11; Ribosomal protein L11. Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA, form the L7/L12 stalk on the surface of the large subunit of the ribosome. The homologous eukaryotic cytoplasmic protein is also called 60S ribosomal ...
Nucleotide Protein
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