U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WD-40 repeat family protein / zfwd4 protein (ZFWD4) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834979, updated on 18-Sep-2024

Summary

Official Full Name
WD-40 repeat family protein / zfwd4 protein (ZFWD4)
Primary source
TAIR:AT5G49200
Locus tag
AT5G49200
See related
Araport:AT5G49200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K21P3.7; K21P3_7
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (19947689..19949175, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene sucrose synthase 2 Neighboring gene stress response NST1-like protein Neighboring gene Pectin lyase-like superfamily protein

General gene information

NM_124297.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
WD-40 repeat family protein / zfwd4 protein (ZFWD4)
NP_199731.1
  • WD-40 repeat family protein / zfwd4 protein (ZFWD4); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / zfwd3 protein (ZFWD3) (TAIR:AT5G40880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19947689..19949175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124297.2NP_199731.1  WD-40 repeat family protein / zfwd4 protein (ZFWD4) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199731.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FE91
    UniProtKB/TrEMBL
    A0A178UC98, A0A654G9L7, A0A7G2FFI1
    Conserved Domains (3) summary
    smart00356
    Location:94114
    ZnF_C3H1; zinc finger
    sd00039
    Location:177256
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:123411
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...