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DnaJ heat shock amino-terminal domain protein (DUF1977) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834965, updated on 18-Sep-2024

Summary

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Official Full Name
DnaJ heat shock amino-terminal domain protein (DUF1977)
Primary source
TAIR:AT5G49060
Locus tag
AT5G49060
See related
Araport:AT5G49060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K20J1.3; K20J1_3
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (19886308..19888571)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene universal stress A-like protein Neighboring gene ncRNA Neighboring gene 3-ketoacyl-CoA synthase 21 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001344813.1
NM_124283.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DnaJ heat shock amino-terminal domain protein (DUF1977)
NP_199717.2
  • FUNCTIONS IN: protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) (TAIR:AT3G57340.2); Has 23804 Blast hits to 23788 proteins in 3287 species: Archae - 182; Bacteria - 9342; Metazoa - 4208; Fungi - 2292; Plants - 2452; Viruses - 18; Other Eukaryotes - 5310 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19886308..19888571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124283.5 → NP_199717.2  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199717.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XE5, Q9FH28
    UniProtKB/TrEMBL
    A0A178UDZ3
    Conserved Domains (2) summary
    pfam00226
    Location:99 → 160
    DnaJ; DnaJ domain
    pfam09320
    Location:258 → 344
    DUF1977; Domain of unknown function (DUF1977)

  2. NM_001344813.1 → NP_001331231.1  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XE5, Q9FH28
    UniProtKB/TrEMBL
    A0A178UDZ3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FH28.2

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