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Mitochondrial substrate carrier family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834956, updated on 18-Sep-2024

Summary

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Official Full Name
Mitochondrial substrate carrier family protein
Primary source
TAIR:AT5G48970
Locus tag
AT5G48970
See related
Araport:AT5G48970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K19E20.10; K19E20_10
Summary
Encodes a mitochondrial thiamin diphosphate carrier.
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (19856830..19859847, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene low-molecular-weight cysteine-rich 86 Neighboring gene HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase Neighboring gene pseudo Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of mitochondrial thiamin diphosphate carriers from Arabidopsis and maize. Frelin O, et al. Funct Integr Genomics, 2012 Jun. PMID 22426856
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001344810.1
NM_124274.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables thiamine pyrophosphate transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within thiamine pyrophosphate transmembrane transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within vitamin transmembrane transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mitochondrial substrate carrier family protein
NP_199708.1
  • Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G21390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19856830..19859847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124274.3 → NP_199708.1  Mitochondrial substrate carrier family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199708.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FI73
    UniProtKB/TrEMBL
    A0A178UM23, A0A5S9YEL5
    Conserved Domains (1) summary
    pfam00153
    Location:128 → 218
    Mito_carr; Mitochondrial carrier protein

  2. NM_001344810.1 → NP_001330533.1  Mitochondrial substrate carrier family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BB39
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FI73.1

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