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Cysteine/Histidine-rich C1 domain family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834885, updated on 18-Sep-2024

Summary

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Official Full Name
Cysteine/Histidine-rich C1 domain family protein
Primary source
TAIR:AT5G48320
Locus tag
AT5G48320
See related
Araport:AT5G48320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K23F3.4; K23F3_4
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (19581697..19584772, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ADP glucose pyrophosphorylase 1 Neighboring gene portal protein Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_124207.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cysteine/Histidine-rich C1 domain family protein
NP_199643.1
  • Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G15070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19581697..19584772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124207.4 → NP_199643.1  Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199643.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UGV3, Q9LK82
    Conserved Domains (2) summary
    pfam03107
    Location:876 → 907
    C1_2; C1 domain
    pfam07649
    Location:703 → 732
    C1_3; C1-like domain
Nucleotide Protein
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