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Gut esterase (DUF1350) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834837, updated on 18-Sep-2024

Summary

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Official Full Name
Gut esterase (DUF1350)
Primary source
TAIR:AT5G47860
Locus tag
AT5G47860
See related
Araport:AT5G47860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MCA23.20; MCA23_20
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Genomic context

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Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (19381519..19384422)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene adenosine monophosphate kinase Neighboring gene CRINKLY4 related 4 Neighboring gene cobalt ion-binding protein Neighboring gene eukaryotic release factor 1-1 Neighboring gene NADH-ubiquinone oxidoreductase B8 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_124160.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Gut esterase (DUF1350)
NP_199597.1
  • Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19381519..19384422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124160.3 → NP_199597.1  Gut esterase (DUF1350) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199597.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UA96, A0A5S9YEA1, Q9FIJ5
    Conserved Domains (1) summary
    pfam07082
    Location:88 → 420
    DUF1350; Protein of unknown function (DUF1350)
Nucleotide Protein
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