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Adenine nucleotide alpha hydrolases-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834825, updated on 18-Sep-2024

Summary

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Official Full Name
Adenine nucleotide alpha hydrolases-like superfamily protein
Primary source
TAIR:AT5G47740
Locus tag
AT5G47740
See related
Araport:AT5G47740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MCA23.6; MCA23_6
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (19338511..19339775)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Thiolase family protein Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene ncRNA Neighboring gene D6 protein kinase like 2 Neighboring gene 2-phosphoglycolate phosphatase 2 Neighboring gene farnesyl diphosphate synthase 1 Neighboring gene galacturonosyltransferase 4 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_124148.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Adenine nucleotide alpha hydrolases-like superfamily protein
NP_001190486.1
  • Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1).
NP_199585.2
  • Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 350 Blast hits to 349 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 350; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19338511..19339775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203557.1 → NP_001190486.1  Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190486.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YBZ0, F4JYN2
    Conserved Domains (1) summary
    cd01989
    Location:45 → 201
    STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...

  2. NM_124148.3 → NP_199585.2  Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199585.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YBZ0, Q84JS4
    Conserved Domains (1) summary
    cl00292
    Location:45 → 199
    AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Nucleotide Protein
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