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ERF2 ethylene responsive element binding factor 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834768, updated on 18-Sep-2024

Summary

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Official Symbol
ERF2
Official Full Name
ethylene responsive element binding factor 2
Primary source
TAIR:AT5G47220
Locus tag
AT5G47220
See related
Araport:AT5G47220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATERF-2; ATERF2; ETHYLENE RESPONSE FACTOR- 2; ethylene responsive element binding factor 2; ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2; MQL5.7; MQL5_7
Summary
Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box#Aeidependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.
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Genomic context

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See ERF2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (19171643..19172956, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L19 family protein Neighboring gene RAB GTPase homolog 1A Neighboring gene Hyaluronan / mRNA binding family Neighboring gene pseudo Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ethylene plays an essential role in the recovery of Arabidopsis during post-anaerobiosis reoxygenation. Tsai KJ, et al. Plant Cell Environ, 2014 Oct. PMID 24506560
  2. Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression. McGrath KC, et al. Plant Physiol, 2005 Oct. PMID 16183832, Free PMC Article
  3. Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Fujimoto SY, et al. Plant Cell, 2000 Mar. PMID 10715325, Free PMC Article
  4. Plant vascular cell division is maintained by an interaction between PXY and ethylene signalling. Etchells JP, et al. PLoS Genet, 2012. PMID 23166504, Free PMC Article
  5. The AP2/EREBP family of plant transcription factors. Riechmann JL, et al. Biol Chem, 1998 Jun. PMID 9687012

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Expression of several ethylene biosynthetic genes and ethylene-responsive factors, including ERF1 and ERF2, was induced during reoxygenation.
    Title: Ethylene plays an essential role in the recovery of Arabidopsis during post-anaerobiosis reoxygenation.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_124093.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding TAS
Traceable Author Statement
more info
 PubMed 
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables DNA-binding transcription factor activity TAS
Traceable Author Statement
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within ethylene-activated signaling pathway TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within induced systemic resistance, jasmonic acid mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within phloem or xylem histogenesis IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within positive regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure TAS
Traceable Author Statement
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in nucleus TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
ethylene responsive element binding factor 2
NP_199533.1
  • ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19171643..19172956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124093.3 → NP_199533.1  ethylene responsive element binding factor 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199533.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80338, Q682Y8, Q8LBU9
    UniProtKB/TrEMBL
    A0A178UCP3, A0A5S9YC34
    Conserved Domains (1) summary
    smart00380
    Location:116 → 180
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80338.1

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