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Oligopeptide transporter OPT superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834581, updated on 18-Sep-2024

Summary

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Official Full Name
Oligopeptide transporter OPT superfamily protein
Primary source
TAIR:AT5G45450
Locus tag
AT5G45450
See related
Araport:AT5G45450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MFC19.12; MFC19_12
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (18414991..18415811)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oligopeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Oligopeptide transporter OPT superfamily protein
NP_199358.1
  • Oligopeptide transporter OPT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 958 Blast hits to 958 proteins in 298 species: Archae - 10; Bacteria - 365; Metazoa - 0; Fungi - 177; Plants - 389; Viruses - 1; Other Eukaryotes - 16 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    18414991..18415811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123913.2 → NP_199358.1  Oligopeptide transporter OPT superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199358.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XD33, A0A654F853, Q9FHJ1
    Conserved Domains (1) summary
    cl14607
    Location:1 → 187
    OPT; OPT oligopeptide transporter protein
Nucleotide Protein
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