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ckl7 casein kinase I-like 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834433, updated on 18-Sep-2024

Summary

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Official Symbol
ckl7
Official Full Name
casein kinase I-like 7
Primary source
TAIR:AT5G44100
Locus tag
AT5G44100
See related
Araport:AT5G44100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
casein kinase I-like 7; MLN1.2; MLN1_2
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Genomic context

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See ckl7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (17749057..17752849, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein Neighboring gene Calcium-binding EF-hand family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene RmlC-like cupins superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Promoters of Arabidopsis Casein kinase I-like 2 and 7 confer specific high-temperature response in anther. Li Y, et al. Plant Mol Biol, 2018 Sep. PMID 30145767
  2. Plasmodesmal-associated protein kinase in tobacco and Arabidopsis recognizes a subset of non-cell-autonomous proteins. Lee JY, et al. Plant Cell, 2005 Oct. PMID 16126836, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtCKL2 and AtCKL7 were expressed in early developmental anthers under high temperature (HT) conditions.
    Title: Promoters of Arabidopsis Casein kinase I-like 2 and 7 confer specific high-temperature response in anther.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_001344533.1
NM_123777.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in stigma papilla IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
casein kinase I-like 7
NP_199223.1
  • casein kinase I-like 7 (ckl7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: dual specificity kinase 1 (TAIR:AT1G03930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17749057..17752849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123777.4 → NP_199223.1  casein kinase I-like 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199223.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8W0Z0, Q9FFH8
    UniProtKB/TrEMBL
    A0A178UJP5, A0A5S9YAS8
    Conserved Domains (1) summary
    cd14125
    Location:8 → 282
    STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon

  2. NM_001344533.1 → NP_001330873.1  casein kinase I-like 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8W0Z0, Q9FFH8
    UniProtKB/TrEMBL
    A0A178UJP5, A0A5S9YAS8
    Conserved Domains (1) summary
    cd14125
    Location:8 → 282
    STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FFH8.1

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