U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARD4 RmlC-like cupins superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834407, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ARD4
Official Full Name
RmlC-like cupins superfamily protein
Primary source
TAIR:AT5G43850
Locus tag
AT5G43850
See related
Araport:AT5G43850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATARD4; MQD19.21; MQD19_21
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ARD4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (17627132..17629363, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene aluminum induced protein with YGL and LRDR motifs Neighboring gene heat shock transcription factor A6A Neighboring gene auxin canalization protein (DUF828) Neighboring gene chlorophyllase 2 Neighboring gene methyl-coenzyme M reductase II subunit gamma, putative (DUF3741)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The role of methionine recycling for ethylene synthesis in Arabidopsis. Bürstenbinder K, et al. Plant J, 2007 Jan. PMID 17144895
  2. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
  3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_123752.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acireductone dioxygenase [iron(II)-requiring] activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-methionine salvage from methylthioadenosine IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
RmlC-like cupins superfamily protein
NP_568630.1
  • ARD4; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: L-methionine salvage from methylthioadenosine, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G14710.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17627132..17629363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123752.4 → NP_568630.1  RmlC-like cupins superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568630.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H185, Q8LCE2, Q9FG79
    UniProtKB/TrEMBL
    A0A178UBZ4
    Conserved Domains (1) summary
    pfam03079
    Location:4 → 158
    ARD; ARD/ARD' family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H185.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools