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ckl8 casein kinase I-like 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834350, updated on 18-Sep-2024

Summary

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Official Symbol
ckl8
Official Full Name
casein kinase I-like 8
Primary source
TAIR:AT5G43320
Locus tag
AT5G43320
See related
Araport:AT5G43320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
casein kinase I-like 8; MWF20.1; MWF20_1
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Genomic context

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See ckl8 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (17385760..17389600, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene PLC-like phosphodiesterases superfamily protein Neighboring gene COP1-interacting protein-like protein Neighboring gene Lactate/malate dehydrogenase family protein Neighboring gene phosphate transporter 1;6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodesmal-associated protein kinase in tobacco and Arabidopsis recognizes a subset of non-cell-autonomous proteins. Lee JY, et al. Plant Cell, 2005 Oct. PMID 16126836, Free PMC Article
  2. Members of the Plant CRK Superfamily Are Capable of Trans- and Autophosphorylation of Tyrosine Residues. Nemoto K, et al. J Biol Chem, 2015 Jul 3. PMID 25969537, Free PMC Article
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001344480.1
NM_001344481.1
NM_123698.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
casein kinase I-like 8
NP_199146.1
  • casein kinase I-like 8 (ckl8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase like 13 (TAIR:AT1G04440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17385760..17389600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123698.4 → NP_199146.1  casein kinase I-like 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199146.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q39052, Q9LSX4
    UniProtKB/TrEMBL
    A0A178U8W2, A0A5S9YCW6
    Conserved Domains (2) summary
    cd14125
    Location:8 → 282
    STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon
    pfam00069
    Location:9 → 244
    Pkinase; Protein kinase domain

  2. NM_001344480.1 → NP_001330706.1  casein kinase I-like 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBL3

  3. NM_001344481.1 → NP_001330707.1  casein kinase I-like 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBL3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LSX4.1

Gene LinkOut

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