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PER64 Peroxidase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834223, updated on 18-Sep-2024

Summary

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Official Symbol
PER64
Official Full Name
Peroxidase superfamily protein
Primary source
TAIR:AT5G42180
Locus tag
AT5G42180
See related
Araport:AT5G42180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJC20.29; MJC20_29; peroxidase 64
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Genomic context

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See PER64 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (16852628..16854224)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Glutathione S-transferase family protein Neighboring gene SGNH hydrolase-type esterase superfamily protein Neighboring gene E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein Neighboring gene RING/U-box superfamily protein Neighboring gene Major facilitator superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Overexpression of a peroxidase gene (AtPrx64) of Arabidopsis thaliana in tobacco improves plant's tolerance to aluminum stress. Wu Y, et al. Plant Mol Biol, 2017 Sep. PMID 28815457
  2. Distribution, mobility, and anchoring of lignin-related oxidative enzymes in Arabidopsis secondary cell walls. Yi Chou E, et al. J Exp Bot, 2018 Apr 9. PMID 29481639, Free PMC Article
  3. Analysis of expression profiles of three peroxidase genes associated with lignification in Arabidopsis thaliana. Tokunaga N, et al. Physiol Plant, 2009 Jun. PMID 19453502
  4. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PRX64 localizes to the middle lamella whereas LAC4 localizes throughout the secondary cell wall layers.
    Title: Distribution, mobility, and anchoring of lignin-related oxidative enzymes in Arabidopsis secondary cell walls.
  2. overexpression of AtPrx64 gene might enhance the tolerance of tobacco to Aluminum stress.[AtPrx64]
    Title: Overexpression of a peroxidase gene (AtPrx64) of Arabidopsis thaliana in tobacco improves plant's tolerance to aluminum stress.
  3. AtPrx64 is associated with lignification of sclerenchyma, and is differentially regulated in various tissues and organs.
    Title: Analysis of expression profiles of three peroxidase genes associated with lignification in Arabidopsis thaliana.
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General gene information

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Homology

NM_123583.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables lactoperoxidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall HDA PubMed 

General protein information

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Preferred Names
Peroxidase superfamily protein
NP_199033.1
  • Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16852628..16854224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123583.4 → NP_199033.1  Peroxidase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199033.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q43872
    UniProtKB/TrEMBL
    A0A178UJR4, A0A5S9YAE1, A0A654G737
    Conserved Domains (1) summary
    cd00693
    Location:23 → 316
    secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q43872.1

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