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Transmembrane amino acid transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834185, updated on 18-Sep-2024

Summary

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Official Full Name
Transmembrane amino acid transporter family protein
Primary source
TAIR:AT5G41800
Locus tag
AT5G41800
See related
Araport:AT5G41800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K16L22.8; K16L22_8
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (16733663..16736093)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myosin heavy chain-like protein Neighboring gene ncRNA Neighboring gene COP1-interactive protein 1 Neighboring gene Avr9/Cf-9 rapidly elicited protein Neighboring gene RAB geranylgeranyl transferase alpha subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_123545.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Transmembrane amino acid transporter family protein
NP_568597.1
  • Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G08230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16733663..16736093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123545.4 → NP_568597.1  Transmembrane amino acid transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568597.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L4X4, Q8LDF5, Q9FJ34
    UniProtKB/TrEMBL
    A0A178UJJ8, A0A5S9YA03
    Conserved Domains (1) summary
    cl00456
    Location:28 → 438
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L4X4.1

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