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transferring glycosyl group transferase (DUF604) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834147, updated on 18-Sep-2024

Summary

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Official Full Name
transferring glycosyl group transferase (DUF604)
Primary source
TAIR:AT5G41460
Locus tag
AT5G41460
See related
Araport:AT5G41460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MYC6.16; MYC6_16
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (16589390..16592381, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Nuclear transport factor 2 (NTF2) family protein Neighboring gene Folylpolyglutamate synthetase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_123510.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transferring glycosyl group transferase (DUF604)
NP_198961.1
  • Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16589390..16592381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123510.4 → NP_198961.1  transferring glycosyl group transferase (DUF604) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198961.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKB1, Q9FN55
    Conserved Domains (1) summary
    pfam04646
    Location:245 → 498
    DUF604; Protein of unknown function, DUF604
Nucleotide Protein
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