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FLA20 putative fasciclin-like arabinogalactan protein 20 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834095, updated on 18-Sep-2024

Summary

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Official Symbol
FLA20
Official Full Name
putative fasciclin-like arabinogalactan protein 20
Primary source
TAIR:AT5G40940
Locus tag
AT5G40940
See related
Araport:AT5G40940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MMG1.3; MMG1_3; putative fasciclin-like arabinogalactan protein 20
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Genomic context

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See FLA20 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (16406631..16407930, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene translocase of outer membrane 20-4 Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
putative fasciclin-like arabinogalactan protein 20
NP_198910.1
  • putative fasciclin-like arabinogalactan protein 20 (FLA20); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16406631..16407930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123459.2 → NP_198910.1  putative fasciclin-like arabinogalactan protein 20 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198910.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FGW0
    UniProtKB/TrEMBL
    A0A178UHK5
    Conserved Domains (1) summary
    smart00554
    Location:292 → 384
    FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FGW0.1

Gene LinkOut

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