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A-kinase anchor-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834043, updated on 18-Sep-2024

Summary

Official Full Name
A-kinase anchor-like protein
Primary source
TAIR:AT5G40450
Locus tag
AT5G40450
See related
Araport:AT5G40450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MPO12.160; MPO12_160
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Genomic context

Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (16184650..16195888, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mitogen-activated protein kinase kinase 3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cyclin-dependent kinase inhibitor SMR3-like protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001344333.1
NM_123409.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within lytic vacuole organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in cytosol HDA PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
A-kinase anchor-like protein
NP_198861.4
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16184650..16195888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123409.6NP_198861.4  A-kinase anchor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198861.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y9P6, F4KHD5
    Conserved Domains (3) summary
    PTZ00121
    Location:50751
    PTZ00121; MAEBL; Provisional
    COG5271
    Location:12151641
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR00927
    Location:15521782
    2A1904; K+-dependent Na+/Ca+ exchanger
  2. NM_001344333.1NP_001330812.1  A-kinase anchor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y9P6, F4KHD5
    Conserved Domains (3) summary
    PTZ00121
    Location:50751
    PTZ00121; MAEBL; Provisional
    COG5271
    Location:12151641
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR00927
    Location:15521782
    2A1904; K+-dependent Na+/Ca+ exchanger