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Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833712, updated on 18-Sep-2024

Summary

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Official Full Name
Chaperone DnaJ-domain superfamily protein
Primary source
TAIR:AT5G37380
Locus tag
AT5G37380
See related
Araport:AT5G37380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MNJ8.20; MNJ8_20
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (14816734..14819346, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene LOW protein: ammonium transporter 1-like protein Neighboring gene PRP38 family protein Neighboring gene miscRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO. Ichino L, et al. Science, 2021 Jun 3. PMID 34083448, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001085204.2
NM_001125851.2
NM_001125852.2
NM_001344191.1
NM_001344192.1
NM_001344193.1
NM_001344194.1
NM_123097.5
NM_180771.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chromatin binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription corepressor activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Chaperone DnaJ-domain superfamily protein
NP_001078673.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20231 Blast hits to 19941 proteins in 3237 species: Archae - 147; Bacteria - 8602; Metazoa - 3333; Fungi - 1703; Plants - 2044; Viruses - 29; Other Eukaryotes - 4373 (source: NCBI BLink).
NP_001119323.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001318687.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_198554.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
NP_851102.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20231 Blast hits to 19941 proteins in 3237 species: Archae - 147; Bacteria - 8602; Metazoa - 3333; Fungi - 1703; Plants - 2044; Viruses - 29; Other Eukaryotes - 4373 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14816734..14819346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001085204.2 → NP_001078673.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078673.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  2. NM_123097.5 → NP_198554.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198554.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  3. NM_001344193.1 → NP_001332212.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  4. NM_001344191.1 → NP_001318687.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  5. NM_180771.2 → NP_851102.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851102.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  6. NM_001344192.1 → NP_001332211.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  7. NM_001125852.2 → NP_001119324.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119324.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  8. NM_001125851.2 → NP_001119323.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119323.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain

  9. NM_001344194.1 → NP_001332210.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJP7, A0A5S9Y987, Q9FHS7
    Conserved Domains (1) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain
Nucleotide Protein
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