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ARM repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833703, updated on 18-Sep-2024

Summary

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Official Full Name
ARM repeat superfamily protein
Primary source
TAIR:AT5G37290
Locus tag
AT5G37290
See related
Araport:AT5G37290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MNJ8.8; MNJ8_8
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (14762341..14764410)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene O-acyltransferase (WSD1-like) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001344176.1
NM_001344177.1
NM_123088.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ARM repeat superfamily protein
NP_001318685.1
  • ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_198545.1
  • ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14762341..14764410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123088.4 → NP_198545.1  ARM repeat superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198545.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKN2, A0A654G5M0, B3H618, Q8L8P2, Q9FHT6
    Conserved Domains (2) summary
    sd00043
    Location:23 → 49
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:94 → 133
    Arm; Armadillo/beta-catenin-like repeat

  2. NM_001344177.1 → NP_001331399.1  ARM repeat superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BDQ7

  3. NM_001344176.1 → NP_001318685.1  ARM repeat superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKN2, A0A654G5M0, B3H618, Q8L8P2, Q9FHT6
    Conserved Domains (2) summary
    sd00043
    Location:23 → 49
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:94 → 133
    Arm; Armadillo/beta-catenin-like repeat
Nucleotide Protein
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