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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833509, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G35460
Locus tag
AT5G35460
See related
Araport:AT5G35460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MOK9.4; MOK9_4
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Sequence:
Chromosome: 5; NC_003076.8 (13672463..13675503)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene General transcription factor 2-related zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001344105.1
NM_122937.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_001318675.1
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2838 (InterPro:IPR021261); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    13672463..13675503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344105.1 → NP_001318675.1  uncharacterized protein AT5G35460 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FJB4
    UniProtKB/TrEMBL
    A0A178UA26, A0A5S9Y8N4, A0A654G5A0
    Conserved Domains (1) summary
    pfam10998
    Location:68 → 174
    DUF2838; Protein of unknown function (DUF2838)

  2. NM_122937.3 → NP_198396.1  uncharacterized protein AT5G35460 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198396.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FJB4
    UniProtKB/TrEMBL
    A0A178UA26, A0A5S9Y8N4, A0A654G5A0
    Conserved Domains (1) summary
    pfam10998
    Location:68 → 174
    DUF2838; Protein of unknown function (DUF2838)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FJB4.1

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