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Pentatricopeptide repeat (PPR) superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832929, updated on 18-Sep-2024

Summary

Official Full Name
Pentatricopeptide repeat (PPR) superfamily protein
Primary source
TAIR:AT5G28420
Locus tag
AT5G28420
See related
Araport:AT5G28420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21B23.80; F21B23_80
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Genomic context

Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (10364614..10365468)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

General gene information

NM_147928.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
is_active_in cellular_component  

General protein information

Preferred Names
Pentatricopeptide repeat (PPR) superfamily protein
NP_680233.1
  • Pentatricopeptide repeat (PPR) superfamily protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44935.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    10364614..10365468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_147928.2NP_680233.1  Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680233.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4K742
    Conserved Domains (2) summary
    PLN03077
    Location:190
    PLN03077; Protein ECB2; Provisional
    sd00004
    Location:1039
    PPR; PPR repeat [structural motif]
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