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Threonyl-tRNA synthetase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832741, updated on 18-Sep-2024

Summary

Official Full Name
Threonyl-tRNA synthetase
Primary source
TAIR:AT5G26830
Locus tag
AT5G26830
See related
Araport:AT5G26830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2P16.7; F2P16_7
Summary
Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.
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Genomic context

Location:
chromosome: 5
Exon count:
20
Sequence:
Chromosome: 5; NC_003076.8 (9437187..9441822)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pectin lyase-like superfamily protein Neighboring gene iron-regulated protein 3 Neighboring gene uncharacterized protein Neighboring gene Uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_122565.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Threonyl-tRNA synthetase
NP_198035.2
  • Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    9437187..9441822
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122565.3NP_198035.2  Threonyl-tRNA synthetase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198035.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04630, O81907, Q84TG4, Q94AG0
    UniProtKB/TrEMBL
    A0A178UFA1, A0A654G4E0
    Conserved Domains (1) summary
    PLN02908
    Location:28708
    PLN02908; threonyl-tRNA synthetase