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organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832714, updated on 18-Sep-2024

Summary

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Official Full Name
organic solute transporter ostalpha protein (DUF300)
Primary source
TAIR:AT5G26740
Locus tag
AT5G26740
See related
Araport:AT5G26740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (9291839..9294860)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene Putative membrane lipoprotein Neighboring gene DEAD box RNA helicase (RH3) Neighboring gene uncharacterized protein Neighboring gene Fasciclin-like arabinogalactan family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001085156.2
NM_180540.3
NM_203107.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
organic solute transporter ostalpha protein (DUF300)
NP_001078625.1
  • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
NP_850871.1
  • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
NP_974836.1
  • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    9291839..9294860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_203107.3 → NP_974836.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974836.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178ULL2, O65254, Q949Z2
    Conserved Domains (1) summary
    pfam03619
    Location:11 → 268
    Solute_trans_a; Organic solute transporter Ostalpha

  2. NM_180540.3 → NP_850871.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850871.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178ULL2, O65254, Q949Z2
    Conserved Domains (1) summary
    pfam03619
    Location:11 → 268
    Solute_trans_a; Organic solute transporter Ostalpha

  3. NM_001085156.2 → NP_001078625.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078625.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178ULL2, O65254, Q949Z2
    Conserved Domains (1) summary
    pfam03619
    Location:11 → 268
    Solute_trans_a; Organic solute transporter Ostalpha
Nucleotide Protein
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